RNA-seq of Klossia helicina - SRA

SRX22226528: RNA-seq of Klossia helicina
1 ILLUMINA (NextSeq 500) run: 14.2M spots, 4.3G bases, 1.8Gb downloads

Design: cDNA was generated from pools of 4-20 cells using the Smart-Seq2 protocol. Sequencing libraries were prepared using the Nextera XT DNA Library Preparation Kit. Sequencing was performed on Illumina NextSeq using 150 bp paired-end reads

Submitted by: University of British Columbia

Study: Phylogenomics reveals Adeleorina are an ancient and distinct subgroup of Apicomplexa

PRJNA1032149 • SRP468427 • All experiments • All runs

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Transcriptomes and WGS were generated and used in phylogenomic analyses showing that Adeleorina are not closely related to any of the currently sampled apicomplexan subgroups, and instead fall as a sister to a large clade encompassing Coccidia, Protococcidia, Hematozoa, and Nephromycida, collectively. This resolves Adeleorina as a key independently-branching group, separate from coccidians, on the tree of Apicomplexa

Sample: Microbe sample from Klossia helicina

SAMN37984884 • SRS19281496 • All experiments • All runs

Organism: Klossia helicina

Library:

Name: Klossia_INVan2021_t6_1

Instrument: NextSeq 500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC SINGLE CELL

Selection: cDNA

Layout: PAIRED

Runs: 1 run, 14.2M spots, 4.3G bases, 1.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR26523019	14,187,751	4.3G	1.8Gb	2024-03-19

ID:: 30185177

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